PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.A6WNC
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 163aa    MW: 18223.7 Da    PI: 7.1617
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.A6WNCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.21.1e-063381855
                 HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 + ++ Lr+llP ++   ++K s ++   +Av+YIk++q
  Aradu.A6WNC  3 TLYSSLRSLLPLQF--IKGKRSISDHMNEAVNYIKYMQ 38
                 6799********65..********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.197137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-6363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-5456IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MATLYSSLRS LLPLQFIKGK RSISDHMNEA VNYIKYMQNN IKELGAKRDE LKKKKKLSNY  60
YHHHDNNDKP TSSTNRYFTL HESDNGVLGI EITGGAAAAA GEEEGVTLSE ILGLLVEEEG  120
LEVLSYLSSK VNGRLVHSVQ CEVVNSNSVD LFELRRKLAS LIQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15056LKKKKKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015967518.11e-115PREDICTED: transcription factor bHLH118-like
TrEMBLA0A0B2RHW14e-56A0A0B2RHW1_GLYSO; Transcription factor bHLH126
TrEMBLI1MQ594e-56I1MQ59_SOYBN; Uncharacterized protein
STRINGGLYMA16G32620.11e-55(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.14e-21bHLH family protein